Braak stage 1, 100% of pigmented neurons left
parkinsonconnecting

Gene record

SHANK3

SH3 and multiple ankyrin repeat domains 3

translation score 0.40, read 2026-10-20; 1 sealed predictions, 0 held; 2 receipts.

Six readers

readerfoundscore
genetics
Open Targets
no genetic evidence; overall 0.07 from other evidence0.00
cell type
Human Protein Atlas
cell type enhanced in brain excitatory neurons (70 nCPM)1.00
chemistry
Open Targets
hard to drug0.00
trials
ClinicalTrials.gov
no Parkinson's trials on record: an open field1.00
literature
PubMed
7 Parkinson's papers of 1,0170.73
pathways
Reactome
in no curated pathway0.00

No case: the score is under the bar. Receipt 3787

Sealed predictions

  1. SHANK3 in dopamine neurons, braak-0.35 (p 0.360) → -0.83 (p 0.005)receipt 3794

Swarm cases

receipt 3794: SHANK3 in dopamine neurons, braak

power
full sample -0.44 (p 0.066, n 18), 95% CI -0.75 to +0.03. the interval is wide: not enough donors to tell.
confounder
adjusted for sex: -0.43 (p 0.079, n 18). does not hold up.
composition
dopamine neurons share of nuclei vs axis +0.05 (p 0.854); controlling for it: -0.58 (p 0.011, n 18). not the mix.
skeptic
leave-one-out range -0.60 to -0.37, sign flips 0; without severely affected donors -0.44 (p 0.066, n 18). robust.
cell type
no other cell group does better.
axis
no measure beats "tracks Braak Lewy-body stage" for SHANK3 in dopamine neurons.

case closed: nothing better to follow up.

Receipts

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