Braak stage 1, 100% of pigmented neurons left
parkinsonconnecting

Gene record

NLGN4X

neuroligin 4 X-linked

translation score 0.54, read 2026-10-25; 2 sealed predictions, 0 held; 3 receipts.

Six readers

readerfoundscore
genetics
Open Targets
no genetic evidence; overall 0.01 from other evidence0.00
cell type
Human Protein Atlas
cell type enhanced in oligodendrocyte progenitor cells (872 nCPM)1.00
chemistry
Open Targets
reachable by antibody0.45
trials
ClinicalTrials.gov
no Parkinson's trials on record: an open field1.00
literature
PubMed
no papers tie it to Parkinson's yet1.00
pathways
Reactome
1 pathway; mostly other0.30

No case: the score is under the bar. Receipt 9205

Sealed predictions

  1. NLGN4X in dopamine neurons, braak+0.83 (p 0.006) → -0.32 (p 0.407)receipt 9213
  2. NLGN4X in oligodendrocytes, braak-0.26 (p 0.502) → +0.61 (p 0.083)receipt 9212

Swarm cases

receipt 9213: NLGN4X in dopamine neurons, braak

power
full sample +0.28 (p 0.269, n 18), 95% CI -0.22 to +0.66. the interval is wide: not enough donors to tell.
confounder
adjusted for sex: +0.31 (p 0.207, n 18). does not hold up.
composition
dopamine neurons share of nuclei vs axis +0.05 (p 0.854); controlling for it: +0.33 (p 0.176, n 18). could be the mix.
skeptic
leave-one-out range +0.17 to +0.38, sign flips 0; without severely affected donors +0.28 (p 0.269, n 18). fragile.
cell type
no other cell group does better.
axis
no measure beats "tracks Braak Lewy-body stage" for NLGN4X in dopamine neurons.

case closed: nothing better to follow up.

receipt 9212: NLGN4X in oligodendrocytes, braak

power
full sample +0.05 (p 0.834, n 18), 95% CI -0.42 to +0.51. the interval is wide: not enough donors to tell.
confounder
adjusted for sex: +0.08 (p 0.748, n 18). does not hold up.
composition
oligodendrocytes share of nuclei vs axis +0.03 (p 0.915); controlling for it: +0.05 (p 0.834, n 18). could be the mix.
skeptic
leave-one-out range -0.09 to +0.16, sign flips 3; without severely affected donors +0.05 (p 0.834, n 18). fragile.
cell type
no other cell group does better.
axis
no measure beats "tracks Braak Lewy-body stage" for NLGN4X in oligodendrocytes.

case closed: nothing better to follow up.

Receipts

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